Utilities

x3cflux.get_non_constant_names(simulator)	Returns the names of non-constant (i.e. neither explicitly nor implicitly constrained) parameters.
x3cflux.get_inequalities_from_bounds(...)	Turns a list of bounds into a system of linear inequality constraints of a metabolic model (defined by the simulator).
x3cflux.compute_closest_interior_point(...)	Computes an interior point of the polytope that is closest in 2-norm to the given one.
x3cflux.compute_perturbed_measurements(...)	Computes noisy measurements from simulated ones.
x3cflux.create_simulator_from_measurements(...)	Creates a new simulator object from measurement data.
x3cflux.VectorLinearEquationSystem	System of linear equations
x3cflux.MatrixLinearEquationSystem	System of linear equations
x3cflux.VectorLinearIVP	System of linear initial value problems
x3cflux.MatrixLinearIVP	System of linear initial value problems
x3cflux.VectorLESSolver	Python interface for linear equation system solvers
x3cflux.MatrixLESSolver	Python interface for linear equation system solvers
x3cflux.VectorLUSolver	Linear equation system solver using LU decomposition
x3cflux.MatrixLUSolver	Linear equation system solver using LU decomposition
x3cflux.VectorCubicHermiteSpline	Cubic splines defined by Hermite conditions
x3cflux.MatrixCubicHermiteSpline	Cubic splines defined by Hermite conditions
x3cflux.VectorLinearIVPSolver	Python interface for linear initial value problem solvers
x3cflux.MatrixLinearIVPSolver	Python interface for linear initial value problem solvers
x3cflux.VectorLinearSDIRK43Solver	Linear initial value problem solver using SDIRK43 scheme
x3cflux.MatrixLinearSDIRK43Solver	Linear initial value problem solver using SDIRK43 scheme
x3cflux.VectorLinearCVODESolver	Linear initial value problem solver from SUNDIALS CVODE (BDF method)
x3cflux.MatrixLinearCVODESolver	Linear initial value problem solver from SUNDIALS CVODE (BDF method)