Experimental Design

x3cflux.parse_tracer_mixtures(file_name)

Parse spaces of possible tracer mixtures from XML file.

x3cflux.TracerMixtureSpace(metabolite_name, ...)

Space of labeled species (or even sets thereof) that can be combined into a tracer mixture.

x3cflux.compute_mixture_samples(...)

Compute tracer mixture samples from a simplex according to given granularity.

x3cflux.create_simulator_from_inputs(...[, ...])

Creates simulator for multiple labeling experiments from given measurement configuration, replacing inputs according to given substrates.

x3cflux.compute_ed_criteria(simulator, ...)

Compute experimental design statistics on a grid of tracer mixtures, potentially from different substrates.